Publications

Readers of this home page who are interested in obtaining reprints of the publications listed below, are welcome to contact me. 

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2021
 

Foraging trade-offs, flagellar arrangements, and flow architecture of planktonic protists

Nielsen, Lasse Tor ; Kiørboe, Thomas
in: Proceedings of the National Academy of Sciences of the United States of America, vol: 118, issue: 3

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2021     |    DOI: https://doi.org/10.1073/pnas.2009930118

2020
 

A general size- and trait-based model of plankton communities

Serra-Pompei, Camila ; Soudijn, Floor ; Visser, André W. ; Kiørboe, Thomas ; Andersen, Ken Haste
in: Progress in Oceanography, vol: 189

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.1016/j.pocean.2020.102473

 

Decreasing phytoplankton size adversely affects ocean food chains

Brander, Keith ; Kiørboe, Thomas
in: Global Change Biology, vol: 26, issue: 10, pages: 5356-5357

Type: Journal article

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.1111/gcb.15216

 

Diatom defence: Grazer induction and cost of shell‐thickening

Grønning, Josephine ; Kiørboe, Thomas
in: Functional Ecology, vol: 34, issue: 9, pages: 1790-1801

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.1111/1365-2435.13635

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Dual-band fluorosensor for discriminating non-eating from algae-eating zooplankton in aquatic environments

Nielsen, J. H. ; Pedersen, C. ; Kiørboe, Thomas ; Nikolajsen, Thomas ; Brydegaard, M. ; Rodrigo, Peter John
in: OSA Continuum, vol: 3, issue: 7, pages: 1730-1738

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.1364/OSAC.389089

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Et vandigt våbenkapløb

Kiørboe, Thomas ; Grønning, Josephine
in: Aktuel Naturvidenskab, vol: 5, pages: 20-22

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020

 

Feasibility study of the use of autofluorescence for distinguishing sea lice, lepeophtheirus salmonis.

Nielsen, Josefine Holm ; Pedersen, Christian ; Kiørboe, Thomas ; Nikolajsen, Thomas ; Brydegaard, Mikkel ; Rodrigo, Peter John
Presented at:
2nd International Scientific Conference in Aquatic Animal Epidemiology

Type: Conference abstract for conference (Peer reviewed)

Status: Published     |    Year: 2020

 

Havets økologi på formel

Kiørboe, Thomas
in: Carlsbergfondet. Aarsskrift, vol: 2020, pages: 16-19

Type: Journal article

Status: Published     |    Year: 2020

 

Heterotrophic eukaryotes show a slow-fast continuum, not a gleaner-exploiter trade-off

Kiørboe, Thomas ; Thomas, Mridul K.
in: Proceedings of the National Academy of Sciences of the United States of America, vol: 117, issue: 40

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.1073/pnas.2008370117

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Hydrodynamics of sponge pumps and evolution of the sponge body plan

Asadzadeh, Seyed Saeed ; Kiørboe, Thomas ; Larsen, Poul S. ; P. Leys, Sally ; Yahel, Gitai ; Walther, Jens H.
in: eLife

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.7554/eLife.61012

 

Hydrodynamics Shed Light on Dinoflagellate Evolution

Schuech, R. ; Nielsen, T. L. ; Humphries, S. ; Smith, D. ; Kiorboe, T.
in: Integrative and Comparative Biology, vol: 60, pages: E207-E207

Type: Conference abstract in journal (Peer reviewed)

Status: Published     |    Year: 2020

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Kinematic and Dynamic Scaling of Copepod Swimming

Svetlichny, Leonid ; Larsen, Poul S. ; Kiørboe, Thomas
in: Fluids , vol: 5, issue: 2

Type: Review (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.3390/fluids5020068

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The 2020 motile active matter roadmap

Gompper, Gerhard ; Winkler, Roland G ; Speck, Thomas ; Solon, Alexandre ; Nardini, Cesare ; Peruani, Fernando ; Löwen, Hartmut ; Golestanian, Ramin ; Kaupp, U Benjamin ; Alvarez, Luis ; Kiørboe, Thomas ; Lauga, Eric ; Poon, Wilson C K ; DeSimone, Antonio ; Muiños-Landin, Santiago ; Fischer, Alexander ; Söker, Nicola A ; Cichos, Frank ; Kapral, Raymond ; Gaspard, Pierre ; Ripoll, Marisol ; Sagues, Francesc ; Doostmohammadi, Amin ; Yeomans, Julia M ; Aranson, Igor S ; Bechinger, Clemens ; Stark, Holger ; Hemelrijk, Charlotte K ; Nedelec, François J ; Sarkar, Trinish ; Aryaksama, Thibault ; Lacroix, Mathilde ; Duclos, Guillaume ; Yashunsky, Victor ; Silberzan, Pascal ; Arroyo, Marino ; Kale, Sohan
in: Journal of Physics: Condensed Matter, vol: 32, issue: 19

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.1088/1361-648x/ab6348

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The effect of tethering on the clearance rate of suspension-feeding plankton

Andersen, Anders ; Kiørboe, Thomas
in: Proceedings of the National Academy of Sciences, vol: 117, issue: 48, pages: 30101-30103

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.1073/pnas.2017441117

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The effects of surface proximity and force orientation on the feeding flows of microorganisms on solid surfaces

Rode, Mads Boje ; Meucci, Giulia ; Seegert, Kristian ; Kiørboe, Thomas ; Andersen, Anders
in: Physical Review Fluids, vol: 5

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2020     |    DOI: https://doi.org/10.1103/PhysRevFluids.5.123104

2019
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Biogeography of zooplankton feeding strategy

Prowe, Almut Eva Friederike ; Visser, André W. ; Andersen, Ken Haste ; Chiba, Sanae ; Kiørboe, Thomas
in: Limnology and Oceanography, vol: 64, issue: 2, pages: 661-678

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1002/lno.11067

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Bottom-up behaviourally mediated trophic cascades in plankton food webs

van Someren Gréve, Hans ; Kiørboe, Thomas ; Almeda, Rodrigo
in: Proceedings of the Royal Society B: Biological Sciences, vol: 286, issue: 1896

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1098/rspb.2018.1664

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Climate change has altered zooplankton-fuelled carbon export in the North Atlantic

Brun, Philipp Georg ; Stamieszkin, Karen ; Visser, Andre W. ; Licandro, Priscilla ; Payne, Mark ; Kiørboe, Thomas
in: Nature Ecology & Evolution, vol: 3, issue: 3, pages: 416-423

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1038/s41559-018-0780-3

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Competition-defense tradeoff increases the diversity of microbial plankton communities and dampens trophic cascades

Cadier, Mathilde ; Andersen, Ken Haste ; Visser, Andre ; Kiørboe, Thomas
in: Oikos, vol: 128, issue: 7, pages: 1027-1040

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1111/oik.06101

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Dense dwarfs versus gelatinous giants: The trade-offs and physiological limits determining the body plan of planktonic filter feeders

Dölger, Julia ; Kiørboe, Thomas ; Andersen, Anders
in: American Naturalist, vol: 194, issue: 2

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1086/703656

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Hydrodynamic functionality of the lorica in choanoflagellates

Asadzadeh, Seyed Saeed ; Nielsen, Lasse Tor ; Andersen, Anders ; Dölger, Julia ; Kiørboe, Thomas ; Larsen, Poul S. ; Walther, Jens H.
in: Journal of the Royal Society. Interface, vol: 16, issue: 150

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1098/rsif.2018.0478

 

Investigation of autofluorescence in zooplankton for use in classification of larval salmon lice

Nielsen, Josefine Holm ; Pedersen, Christian ; Kiørboe, Thomas ; Nikolajsen, T. ; Brydegaard, Mikkel ; Rodrigo, Peter John
in: Applied Optics, vol: 58, issue: 26, pages: 7022-7027

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1364/AO.58.007022

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Nutrient affinity, half-saturation constants and the cost of toxin production in dinoflagellates

Kiørboe, Thomas ; Andersen, Ken Haste
in: Ecology Letters, vol: 22, issue: 3, pages: 558-560

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1111/ele.13208

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Rapid shifts in the thermal sensitivity of growth but not development rate causes temperature-size response variability during ontogeny in arthropods

Horne, Curtis R. ; Hirst, Andrew G. ; Atkinson, David ; Almeda, Rodrigo ; Kiørboe, Thomas
in: Oikos, vol: 128, issue: 6, pages: 823-835

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1111/oik.06016

  PDF

Silicified cell walls as a defensive trait in diatoms

Pančić, Marina ; Torres, Rocio Rodriguez ; Almeda, Rodrigo ; Kiørboe, Thomas
in: Proceedings of the Royal Society B: Biological Sciences, vol: 286, issue: 1901

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1098/rspb.2019.0184

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The cost of toxin production in phytoplankton: the case of PST producing dinoflagellates

Chakraborty, Subhendu ; Pančić, Marina ; Andersen, Ken Haste ; Kiørboe, Thomas
in: I S M E Journal, vol: 13, issue: 1, pages: 64-75

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1038/s41396-018-0250-6

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Trait-based modelling of multi-trophic diel vertical migrations and active carbon transport

Pinti, Jerome Pierre Alexandre ; Kiørboe, Thomas ; Thygesen, Uffe Høgsbro ; Visser, Andre
Presented at:
4th International Workshop on Trait-based approaches to Ocean Life

Type: Conference abstract for conference (Peer reviewed)

Status: Published     |    Year: 2019

  PDF

Trophic interactions drive the emergence of diel vertical migration patterns: a game-theoretic model of copepod communities

Pinti, Jerome Pierre Alexandre ; Kiørboe, Thomas ; Thygesen, Uffe Høgsbro ; Visser, Andre
in: Proceedings of the Royal Society B: Biological Sciences, vol: 286, issue: 1911

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2019     |    DOI: https://doi.org/10.1098/rspb.2019.1645

2018
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Adaptive feeding behavior and functional responses in pelagic copepods

Kiørboe, Thomas ; Saiz, Enrico ; Tiselius, Peter ; Andersen, Ken Haste
in: Limnology and Oceanography, vol: 63, issue: 1, pages: 308-321

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1002/lno.10632

  PDF

A trait-based approach to ocean ecology

Kiørboe, Thomas ; Visser, Andre ; Andersen, Ken Haste
in: ICES Journal of Marine Science, vol: 75, issue: 6, pages: 1849-1863

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1093/icesjms/fsy090

  PDF

Boom and burst: Life history, environmental noise, and the (un)predictability of jellyfish blooms

Schnedler-Meyer, Nicolas Azaña ; Kiørboe, Thomas ; Mariani, Patrizio
in: Frontiers in Marine Science, vol: 5

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.3389/fmars.2018.00257

 

Flagellate flow

Asadzadeh, Saeed Sayed ; Riley, Emily ; Nielsen, Lasse Tor ; Kiørboe, Thomas ; Andersen, Anders ; Walther, Jens Honore
Presented at:
71st Annual Meeting of the APS Division of Fluid Dynamics

Type: Poster

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1103/APS.DFD.2018.GFM.P0034

  PDF

Foraging response and acclimation of ambush feeding and feeding-current feeding copepods to toxic dinoflagellates

Xu, Jiayi ; Nielsen, Lasse Tor ; Kiørboe, Thomas
in: Limnology and Oceanography, vol: 63, issue: 4, pages: 1449-1461

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1002/lno.10782

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Grazer-induced transcriptomic and metabolomic response of the chain-forming diatom Skeletonema marinoi

Amato, Alberto ; Sabatino, Valeria ; Nylund, Göran M. ; Bergkvist, Johanna ; Basu, Swaraj ; Andersson, Mats X. ; Sanges, Remo ; Godhe, Anna ; Kiørboe, Thomas ; Selander, Erik ; Ferrante, Maria I.
in: I S M E Journal, vol: 12, pages: 1594-1604

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1038/s41396-018-0094-0

  PDF

Hydrodynamic functionality of the lorica in choanoflagellates

Walther, Jens Honore ; Asadzadeh, Seyed Saeed ; Nielsen, Lasse Tor ; Andersen, Anders ; Dölger, Julia ; Kiørboe, Thomas ; Larsen, Poul Scheel
Presented at:
71st Annual Meeting of the APS Division of Fluid Dynamics

Type: Conference abstract for conference (Peer reviewed)

Status: Published     |    Year: 2018

 

Investigation of optical signatures for discriminating salmon lice from other species of zooplankton

Nielsen, Josefine Holm ; Prangsma, Jord C. ; Kiørboe, Thomas ; Brydegaard, Mikkel ; Pedersen, Christian ; Rodrigo, Peter John
part of: Proceedings of Applied Industrial Optics: Spectroscopy, Imaging and Metrology 2018 , 2018
Presented at:
Applied Industrial Optics: Spectroscopy, Imaging and Metrology 2018

Type: Article in proceedings (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1364/AIO.2018.AW3A.2

 

Multi trophic diel vertical migrations and active carbon transport

Pinti, Jerome ; Kiørboe, Thomas ; Visser, Andy W.
Presented at:
ICES Annual Science Conference 2018

Type: Conference abstract for conference

Status: Published     |    Year: 2018

  PDF

Phytoplankton defence mechanisms: traits and trade-offs

Pančić, Marina ; Kiørboe, Thomas
in: Biological Reviews, vol: 93, issue: 2, pages: 1269-1303

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1111/brv.12395

  PDF

Prey perception mechanism determines maximum clearance rates of planktonic copepods

Almeda, Rodrigo ; van Someren Gréve, Hans ; Kiørboe, Thomas
in: Limnology and Oceanography, vol: 63, issue: 6, pages: 2695-2707

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1002/lno.10969

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Resting eggs in free living marine and estuarine copepods

Holm, Mark Wejlemann ; Kiørboe, Thomas ; Brun, Philipp Georg ; Licandro, P. ; Almeda, Rodrigo ; Winding Hansen, Benny
in: Journal of Plankton Research, vol: 40, issue: 1, pages: 2-15

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1093/plankt/fbx062

  PDF

Selection for life-history traits to maximize population growth in an invasive marine species

Jaspers, Cornelia ; Marty, Lise ; Kiørboe, Thomas
in: Global Change Biology, vol: 24, issue: 3, pages: 1164-1174

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1111/gcb.13955

  PDF

Study of species identification capabilities of optical detection system for lepeophtheirus salmonis copepodites

Nielsen, Josefine Holm ; Prangsma, Jord C. ; Kiørboe, Thomas ; Brydegaard, Mikkel ; Rodrigo, Peter John ; Pedersen, Christian
Presented at:
Sealice 2018 - 12th International Conference

Type: Poster (Peer reviewed)

Status: Published     |    Year: 2018

  PDF

Swim and fly: escape strategy in neustonic and planktonic copepods

Svetlichny, Leonid ; Larsen, Poul Scheel ; Kiørboe, Thomas
in: Journal of Experimental Biology, vol: 221, issue: 2

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1242/jeb.167262

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Toxic dinoflagellates produce true grazer deterrents

Xu, Jiayi ; Kiørboe, Thomas
in: Ecology, vol: 99, issue: 10, pages: 2240-2249

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2018     |    DOI: https://doi.org/10.1002/ecy.2479

2017
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A trait database for marine copepods

Brun, Philipp Georg ; Payne, Mark ; Kiørboe, Thomas
in: Earth System Science Data, vol: 9, issue: 1, pages: 99-113

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: https://doi.org/10.5194/essd-9-99-2017

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Behavior is a major determinant of predation risk in zooplankton

Almeda, Rodrigo ; van Someren Gréve, Hans ; Kiørboe, Thomas
in: Ecosphere (Washington, D.C.), vol: 8, issue: 2

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: https://doi.org/10.1002/ecs2.1668

  PDF

Computational Fluid Dynamics of Choanoflagellate Filter-Feeding

Asadzadeh, Seyed Saeed ; Walther, Jens Honore ; Nielsen, Lasse Tor ; Kiørboe, Thomas ; Dölger, Julia ; Andersen, Anders Peter
Presented at:
70th Annual Meeting of the American Physical Society Division of Fluid Dynamics (DFD17)

Type: Conference abstract for conference (Peer reviewed)

Status: Published     |    Year: 2017

  PDF

Computational Fluid Dynamics of Choanoflagellate Filter-Feeding

Asadzadeh, Seyed Saeed ; Walther, Jens Honore ; Nielsen, Lasse Tor ; Kiørboe, Thomas ; Dölger, Julia ; Andersen, Anders Peter
Presented at:
Complex Motion in Fluids Summer School

Type: Poster (Peer reviewed)

Status: Published     |    Year: 2017


https://www.tkboe.aqua.dtu.dk/publications
18 JANUARY 2021